Gendoo: Functional profiling of gene and disease features using MeSH vocabulary

Functional Interpretation of Omics Data by Profiling Genes and Diseases Using MeSH–Controlled Vocabulary

MeSH annotation of the chicken genome : 1 MeSH - informed enrichment analysis and 2 MeSH - guided semantic similarity among 3 functional terms and gene products

26 Biomedical vocabularies and ontologies aid in recapitulating biological knowledge. The annotation 27 of gene products is mainly accelerated by Gene Ontology (GO) and more recently by Medical Sub28 ject Headings (MeSH). Here we report the MeSH annotation of the chicken genome and illustrate 29 some features of different MeSH-based analyses, including MeSH-informed enrichment analysis and 30 M...

MeSH-Informed Enrichment Analysis and MeSH-Guided Semantic Similarity Among Functional Terms and Gene Products in Chicken

Biomedical vocabularies and ontologies aid in recapitulating biological knowledge. The annotation of gene products is mainly accelerated by Gene Ontology (GO), and more recently by Medical Subject Headings (MeSH). Here, we report a suite of MeSH packages for chicken in Bioconductor, and illustrate some features of different MeSH-based analyses, including MeSH-informed enrichment analysis and Me...

Diagnosis of the disease using an ant colony gene selection method based on information gain ratio using fuzzy rough sets

With the advancement of metagenome data mining science has become focused on microarrays. Microarrays are datasets with a large number of genes that are usually irrelevant to the output class; hence, the process of gene selection or feature selection is essential. So, it follows that you can remove redundant genes and increase the speed and accuracy of classification. After applying the gene se...

Identification of mild cognitive impairment disease using brain functional connectivity and graph analysis in fMRI data

Background: Early diagnosis of patients in the early stages of Alzheimer's, known as mild cognitive impairment, is of great importance in the treatment of this disease. If a patient can be diagnosed at this stage, it is possible to treat or delay Alzheimer's disease. Resting-state functional magnetic resonance imaging (fMRI) is very common in the process of diagnosing Alzheimer's disease. In th...